PUBLICATIONS

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Pérez-García, S. † , García-Navarrete, M.† , Ruiz Sanchis, D., Prieto Navarro, C.,  Avdovic, M., Pucciariello, O.,  Wabnik, K. 2021. Synchronization of gene expression across eukaryotic communities through chemical rhythms. Nature Communications, 12, 417 († contributed equally)

Story Behind the Paper: https://bioengineeringcommunity.nature.com/posts/synchronization-with-phytohormone-beats

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Perianez-Rodriguez, J., Rodriguez, M.†, Marconi, M.†,  Bustillo-Avendaño, E., Wachsman, G., Sanchez-Corrionero, A., De Gernier, H., Cabrera, J., Perez-Garcia, P., Gude, I., Saez-Somolinos, A., Serrano-Ron, L., Beeckman, T.,  Benfey, PN., Rodríguez-Patón, A., del Pozo, JC., Wabnik, K* and Moreno-Risueno, MA*. 2021, An auxin-regulable oscillatory circuit drives the root clock in Arabidopsis, Science Advances 7, ieabd4722.

(*corresponding authors)(† contributed equally)

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Ötvös, K., Marconi, M., Vega, A., O’Brien, J., Johnson, J., Abualia, R., Antonielli, L., Montesinos, JC., Zhang, Y.,  Tan, S., Cuesta, C., Artner, C., Bouguyon, E., Gojon, A., Friml, J., Gutiérrez, RA., Wabnik, K.* and Eva Benková. 2021. Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport, EMBO J 40, e106862. (*corresponding authors)

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Li, H., Wangenheim, D. von, Zhang, X., Tan, S., Darwish‐Miranda, N., Naramoto, S., Wabnik, K., Rycke, R.D., Kaufmann, W.A., Gütl, D., Tejos, R., Grones, P., Ke, M., Chen, X., Dettmer, J., Friml, J. 2020. Cellular requirements for PIN polar cargo clustering in Arabidopsis thalianaNew Phytologist 229, 351-369.

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Sun, L., Feraru, E., Feraru, M.I., Waidmann, S., Wang, W., Passaia, G., Wang, Z.-Y., Wabnik, K. & Kleine-Vehn, J. 2020. PIN-LIKES Coordinate Brassinosteroid Signaling with Nuclear Auxin Input in Arabidopsis thaliana. Current Biology 30, 1579-1588.

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Waidmann, S., Rosquete, M.R., Schöller, M., Sarkel, E., Lindner, H., LaRue, T., Petřík, I., Dünser, K., Martopawiro, S., Sasidharan, R., Novak, O., Wabnik, K., Dinneny, J.R., Kleine-Vehn, J. 2019. Cytokinin functions as an asymmetric and anti-gravitropic signal in lateral roots. Nature Communications 10, 1–14.

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Žádníková, P.*, Wabnik, K.*, Abuzeineh, A., Gallemi, M., Straeten, D.V.D., Smith, R.S., Inzé, D., Friml, J., Prusinkiewicz, P., Benková, E. 2016. A Model of Differential Growth-Guided Apical Hook Formation in Plants. The Plant Cell 28, 2464–2477. DOI: 10. (*co-authorship)

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Łangowski, Ł., Wabnik, K., Li, H., Vanneste, S., Naramoto, S., Tanaka, H., Friml, J. 2016. Cellular mechanisms for cargo delivery and polarity maintenance at different polar domains in plant cells. Cell Discovery 2, 16018. 

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Chen, Q., Liu, Y., Maere, S., Lee, E., Van Isterdael, G., Xie, Z., Xuan, W., Lucas, J., Vassileva, V., Kitakura, S., Marhavý, P., Wabnik, K., Geldner, N., Benková, E., Le, J., Fukaki, H., Grotewold, E., Li, C., Friml, J., Sack, F., Beeckman, T., Vanneste, S. 2015. A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development. Nature Communications 6, 8821. 

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Šimášková, M., O’Brien, J.A., Khan, M., Van Noorden, G., Ötvös, K., Vieten, A., De Clercq, I., Van Haperen, J.M.A., Cuesta, C., Hoyerová, K., Vanneste, S., Marhavý, P., Wabnik, K., Van Breusegem, F., Nowack, M., Murphy, A., Friml, J., Weijers, D., Beeckman, T., Benková, E. 2015. Cytokinin response factors regulate PIN-FORMED auxin transportersNature Communications 6, 8717. 

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Tian, H.*, Wabnik, K.*, Niu, T., Li, H., Yu, Q., Pollmann, S., Vanneste, S., Govaerts, W., Rolčík, J., Geisler, M., Friml, J., Ding, Z. 2014. WOX5–IAA17 Feedback Circuit-Mediated Cellular Auxin Response Is Crucial for the Patterning of Root Stem Cell Niches in Arabidopsis. Molecular Plant 7, 277–289.  (*co-authorship)

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Cuesta, C., Wabnik, K., Benková, E. 2013. Systems approaches to study root architecture dynamicsFrontiers in Plant Science 4, 537. 

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Wabnik, K., Robert, H.S., Smith, R.S., Friml, J. 2013. Modeling Framework for the establishment of the Apical-Basal Embryonic Axis in Plants. Current Biology 23, 2513–2518. 

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Kleine‐Vehn, J.*, Wabnik, K.*, Martinière, A., Łangowski, Ł., Willig, K., Naramoto, S., Leitner, J., Tanaka, H., Jakobs, S., Robert, S., Luschnig, C., Govaerts, W., Hell, S.W., Runions, J., Friml, J. 2011. Recycling, clustering, and endocytosis jointly maintain PIN auxin carrier polarity at the plasma membrane. Molecular Systems Biology 7, 540. (*co-authorship)

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Wabnik, K., Kleine-Vehn, J., Govaerts, W., Friml, J. 2011. Prototype cell-to-cell auxin transport mechanism by intracellular auxin compartmentalization. Trends in Plant Science 16, 468–475.

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